PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G37100.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ARR-B
Protein Properties Length: 659aa    MW: 71189.2 Da    PI: 6.6899
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G37100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like28.82.8e-09214241128
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAt 28 
                      kpr++W+ eLH++Fv av+qLG  + At
  OGLUM02G37100.1 214 KPRVVWSVELHRKFVAAVNQLGIDNLAT 241
                      79*******************7555555 PP
2Response_reg76.69.1e-26261341109
                      EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHT CS
     Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealka 92 
                      vl vdD+p+ +++l+++l + +y +v+++ ++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++ +ge +++l+ +  
  OGLUM02G37100.1  26 VLAVDDDPVCLKVLETLLLRCQY-HVTTTNQAAIALKMLRENRdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKTVLKGITH 117
                      799********************.***************99999********************87754.558********************* PP

                      TESEEEESS--HHHHHH CS
     Response_reg  93 GakdflsKpfdpeelvk 109
                      Ga d+l Kp+ +eel++
  OGLUM02G37100.1 118 GACDYLLKPVRIEELRN 134
                      ***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 659 aa     Download sequence    
MRAAEERKGV VPAARRRDQF PVGMRVLAVD DDPVCLKVLE TLLLRCQYHV TTTNQAAIAL  60
KMLRENRDMF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSVNGETKT VLKGITHGAC  120
DYLLKPVRIE ELRNIWQHVI RRKFSTRDRA NLDFYEECNK PPNADSDHVH GHVTCGSPDQ  180
SGRPSKKRKE YCSEEEDEGE VNTQDIDDPS APKKPRVVWS VELHRKFVAA VNQLGIDNLA  240
TTYMKYRLYL KRLSAVASQQ VSIVAALGGR DPFLHMGGFE GLQGYQAFTS SAALSSFTPH  300
GLLNSPRNNP AALGTQGVPA SKSIQTMSGS HTLNHSINDA NKYHLSLPGN QKGNLGQGLA  360
TSLGQTQMQQ KWIHEETDDL STILSGNGLS NGMSGTLQSV TSSPLLPQEL AECTQAKIVS  420
QPSIRTSSVS SEHIEGAVGV SSGLLESRVS QQSTIPLSGF STNGLLIHGS FNNTCANKLG  480
GTSSSCAPAR SSNDLMVARD TKGGASSFGG AMLLPPDTEQ KYLNFGGGNG LKQKFDDRTA  540
DSLFDPKFVW SSVPSSQLAS NIGAHHAMSQ RWNNSSSNSS NIGARMIGQA TSSGSTVIPQ  600
MKTDFLVSGD MSMPKNASDL SIPCSFDGLL NSIVKVEKDD VTFSDDLGCG DFYSLGACI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.12e-84ARR-B family protein