PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G31590.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 282aa MW: 28949.3 Da PI: 8.9306

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G31590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.2	4.4e-39	42	101	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +a+kcprC+stntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+s OGLUM02G31590.1 42 PEAVKCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSG 101 5789****************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MQEFQSIPGL AGRLFGGAAA ADIRRAQAQQ GPASRCGGIP SPEAVKCPRC ESTNTKFCYY 60 NNYNLSQPRH FCKSCRRYWT KGGVLRNVPV GGGCRKTKRS GSSSAASSAP STPTAATDNA 120 KNQRRASASS PRSSSGGSGN TSPTAAAATT PTTPATPSSN TIAVINHATT TTTTTNPFPT 180 DVPPPAPIFA DQAAALASLF APPPPPPLPV FSFAAQAKTE DGIASVLLAG QTTAPTAATV 240 ADMTPFTSLD AGIFELGDVP PAAYWNAGSC WTDVPDPTVY LP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	7e-34	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G31590.1