PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G28340.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 224aa    MW: 23916.5 Da    PI: 4.9599
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G28340.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.2e-1853103155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      + +kGVr++   grWv+e+r+p   g ++r++lg+f tae+Aa+a++ a+++l+g
  OGLUM02G28340.1  53 PVFKGVRRRN-PGRWVCEVREP--HG-KQRIWLGTFETAEMAARAHDVAALALRG 103
                      579****887.9******9996..33.5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MDVSAALSSD YSSGTPSPVA ADADDGSSAY MTVSSAPPKR RAGRTKFKET RHPVFKGVRR  60
RNPGRWVCEV REPHGKQRIW LGTFETAEMA ARAHDVAALA LRGRAACLNF ADSPRRLRVP  120
PIGASHDDIR RAAAEAAEAF RPPPDESNAA TEVAAAASGA TNSNAEQFAS HPYYEVMDDG  180
LDLGMQGYLD MAQGMLIDPP PMAGDPAVGG GEDDNDGEVQ LWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.16e-35ERF family protein