PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G26840.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 306aa    MW: 32018.4 Da    PI: 5.4653
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G26840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.2e-19150200255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f++aeeAa a+++a+ +++g
  OGLUM02G26840.1 150 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFDSAEEAAVAYDRAAYRMRG 200
                      8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MLLNPASREV AALDSIRHHL LEEEEEEETP ATAPAPTRRP VYCRSSSFGS LVADQWSESL  60
PFRPNDAEDM VVYGALRDAF SSGWLPDGSF AAVKPESQDS YDGSSIGSFL ASSSSEAGTP  120
GEVTSTEATV TPGIREGEGE AVAVASRGKH YRGVRQRPWG KFAAEIRDPA KNGARVWLGT  180
FDSAEEAAVA YDRAAYRMRG SRALLNFPLR IGSEIAAAAA AAAAAGNKRP YPNPASSGSS  240
SPSSSSSSSS SSSSGSPKRR KRGEAAAASM AMALVPPPPP PEQAPVQLAL PAQPWFAAGP  300
IQQLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.16e-42ERF family protein