PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G11370.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 358aa    MW: 38013.3 Da    PI: 4.7227
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G11370.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.73.7e-31175233259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++ tY+geHnh+
  OGLUM02G11370.1 175 ADVWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRSDPNTFILTYTGEHNHS 233
                      69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MEEELCGNNW DLDAVVRLGC CRRRISPAAV AQQVDPFASF LQQGVAMEVA AEKEVGVEAA  60
WSFPELTVRD GGGGGLGRDA DELLKAFCAA FPSSSSSKSS PLPTPPPPPP TQPQPEQQKP  120
VTVQENLPAP TTAPARASQP AAARQVPAGG VPRSKRRKNQ QKKVVRHVPA DGVSADVWAW  180
RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSRSDPN TFILTYTGEH NHSAPTHRNS  240
LAGTTRNKLP SSSAASAQPQ PPPPSVVVVG AGGGGAEAAG LSPTTPLRTP SMEEDEEEEE  300
EEELLVEDME MAGEDELLFL NGGDDNAALD GTPMSSLFDI ADEPFLPSPW TEPTAAGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.13e-44WRKY family protein