PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G10780.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family Dof
Protein Properties Length: 373aa    MW: 36799.3 Da    PI: 7.3082
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G10780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof113.87.4e-3645101662
           zf-Dof   6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                        cprC+s +tkfCyynnys++qPryfC++CrryWt+GG+lrnvPvGgg+rk+k+ss
  OGLUM02G10780.1  45 PCCPRCNSIKTKFCYYNNYSMAQPRYFCRECRRYWTQGGSLRNVPVGGGCRKSKRSS 101
                      569***************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MASGGALSPV EEKPAVVKTT KAEQHEEEAA VAVKSAAEMM KKSSPCCPRC NSIKTKFCYY  60
NNYSMAQPRY FCRECRRYWT QGGSLRNVPV GGGCRKSKRS SASSASASAA SPPAPAVGAA  120
PPVVPALSSA ISKLLQSEPM AAPCADFPNV LPTFVSTGFE LPAAAGDRLS LGSFGAFGNL  180
SAAVAAPGGG GGSSTTTSFM DMLRGVGGLF DGVGNSHQMG GNGGGGGSYY APLITGAGNG  240
MLMPPPPLPP FSGSLMQHGM QGLFANHAMG GGGGGVMNAG EDGSVMAGLG GGQWPPALGG  300
ADEQQGGGDG GEAVMTKDTG GGASSSASRP DYFYGWNSAG GGVVAGGGIG GNAAAATGAT  360
PWQGLIDSSS AMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.14e-29Dof family protein