PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G09200.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GATA
Protein Properties Length: 347aa    MW: 37286.6 Da    PI: 9.9252
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G09200.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.71.3e-17178211134
             GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                      Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
  OGLUM02G09200.1 178 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 211
                      *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MSTIYMSQLP ATLPLMEGDQ DQGLYPAFHR AKDPPILFPF MIDSAVEHQG QIYGDQGLRR  60
QQVLGESNQQ FNDHMMMGGS DVFLTPSPFR PTIQSIGSDM IQRSSYDPYD IESNNKQHAN  120
GSTSKWMSTP PMKMRIIRKG AATDPEGGAV RKPRRRAQAH QDESQQQLQQ ALGVVRVCSD  180
CNTTKTPLWR SGPCGPKSLC NACGIRQRKA RRAMAAAANG GAAVAPAKSV AVAPVSNKPA  240
ARKEKRAADV DRSLPFKKRC KMVDHVAAAV AATKPTAREV VAAAPKDQDN VIVVGGENAA  300
ATSMPAQNPI SKAAAAASPA FFHGLPRDEI TDAAMLLMTL SCGLVHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.11e-16GATA family protein