PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM02G07480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | B3 | ||||||||
Protein Properties | Length: 289aa MW: 31865.7 Da PI: 9.5996 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 53.8 | 3.4e-17 | 21 | 112 | 9 | 98 |
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS......-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesg......rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +++ l lp +fa+e +g+++e ++ +l r W+vk+ +g+ +l++GW +F++a+gL++gD +vF++dg f +v+v OGLUM02G07480.1 21 PGSSRTKLKLPDEFARELEGEERELRDAKLLVAGVgrrrrgRMWDVKV--VADDGGAYLGRGWLRFARAHGLRDGDLLVFRYDGAAAF--TVTV 110 44556669**********88888777777654222334444*******..999999**************************998888..8888 PP E- CS B3 97 fr 98 f+ OGLUM02G07480.1 111 FD 112 87 PP | |||||||
2 | B3 | 50.9 | 2.8e-16 | 187 | 257 | 17 | 86 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 +p +f e+hg+ +e +++ +grsW+v+l++ r +++r vl+ GW +F+ +ngL +gD++ F+ + OGLUM02G07480.1 187 NVPVEFQEAHGYAARE--KVV-LRMRGRSWTVRLKHtkgrRPRRERAVLRYGWHRFCADNGLAVGDTCFFRALR 257 57999*****998665..455.45599*******998887777788************************9554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MEEQMSNLRL ANFEFFTIIQ PGSSRTKLKL PDEFARELEG EERELRDAKL LVAGVGRRRR 60 GRMWDVKVVA DDGGAYLGRG WLRFARAHGL RDGDLLVFRY DGAAAFTVTV FDDGTMCRRA 120 YHDAAGSGSS SDYDGNDGRG EAAATSQFVV TLRQGNLGKK QAQYLLTNQP TGRRSPAAMA 180 AAAAEQNVPV EFQEAHGYAA REKVVLRMRG RSWTVRLKHT KGRRPRRERA VLRYGWHRFC 240 ADNGLAVGDT CFFRALRSAG SGAGDVDDGD GDHVLSVTVH KADGGDPLE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 224 | 229 | RPRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24645.1 | 1e-13 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM02G07480.1 |