PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G00100.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family C2H2
Protein Properties Length: 127aa    MW: 14000.6 Da    PI: 8.5184
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G00100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.2e-052951123
                     EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                     y+C+ C + F++   L  H+++H
  OGLUM02G00100.1 29 YPCGFCRREFRSAQALGGHMNVH 51
                     99*******************99 PP

Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MNNSSGSSRR EEAWRQQQLI LQAKKARSYP CGFCRREFRS AQALGGHMNV HRRDRARLRL  60
THQPDAALIA SPSTESTPPL LPNLNYPPPP PHDGASSSSP PHLPRPPADD DADADAGLDL  120
ELRLAFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.18e-17C2H2 family protein