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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM01G50190.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GATA |
Protein Properties |
Length: 142aa MW: 15500.7 Da PI: 9.8806 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM01G50190.1 | genome | EnsemblPlants | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 61.2 | 1.3e-19 | 24 | 58 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C+ C+ttkTplWR gp g+k+LCnaCG++yrk+++
OGLUM01G50190.1 24 CADCHTTKTPLWRGGPGGPKSLCNACGIRYRKRRR 58
********************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 142 aa
Download sequence |
MDMDSSSSPV DKVDPDECNG SKACADCHTT KTPLWRGGPG GPKSLCNACG IRYRKRRRAA 60 LGLDSAASAT ATDGAEQQKK TKAKKEKAQE EEVTMELHTV GFRSKDAAVL KQRRRMRRRK 120 CLGEEERAAI LLMALSSGVI YA
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 54 | 58 | RKRRR |
2 | 54 | 84 | RKRRRAALGLDSAASATATDGAEQQKKTKAK |
3 | 54 | 87 | RKRRRAALGLDSAASATATDGAEQQKKTKAKKEK |
4 | 55 | 85 | RKRRRAALGLDSAASATATDGAEQQKKTKAK |
5 | 55 | 88 | RKRRRAALGLDSAASATATDGAEQQKKTKAKKEK |
6 | 112 | 118 | QRRRMRR |
7 | 113 | 119 | RRRMRRR |
8 | 113 | 120 | RRRMRRRK |
9 | 114 | 120 | RRRMRRR |