PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G44090.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 449aa MW: 48388.8 Da PI: 9.0809

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G44090.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.1	8.7e-50	59	184	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp++++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + ++ OGLUM01G44090.1 59 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRAE 151 79*************************.89***********888889************************************* PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkktLvfy+g+apkg++++W+m+eyrl OGLUM01G44090.1 152 NNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRL 184 *****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MHMRRGRAAG GEGEAAAVVV MSRYDNNGHA AAAAAAAVAG GGGNKAAGEV DGHEDDLVMP 60 GFRFHPTEEE LIEFYLRRKV EGKRFNVELI TFLDLYRYDP WELPAMAAIG EKEWFFYVPR 120 DRKYRNGDRP NRVTASGYWK ATGADRMIRA ENNRPIGLKK TLVFYSGKAP KGVRSSWIMN 180 EYRLPPADTD RYHKTEISLC RVYKRTGIDD GHGHVSTARS SAHSRGGGAA PVQDNKQGSS 240 STSTPTPPPT PSKLHLLSSE CTSPPAIVTD HAAMAAHKAP SPRHHQQQQQ QLHAAKPCGG 300 YLQNSSMASA AGGDQQQQFQ QDFAAALYQQ YSKNTSGAFA STYSLLNLVN AASMGSSAAA 360 IDELSSLVGH GTPSYINPAA GSHNYSQFLH LPTTPSSHQP TPAPLGTTTA AAAATLPMSL 420 AAFSDRIWDW NNPIPEAGGR DYSTSTGFK

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MHMRRGRAAG GEGEAAAVVV MSRYDNNGHA AAAAAAAVAG GGGNKAAGEV DGHEDDLVMP  60
GFRFHPTEEE LIEFYLRRKV EGKRFNVELI TFLDLYRYDP WELPAMAAIG EKEWFFYVPR  120
DRKYRNGDRP NRVTASGYWK ATGADRMIRA ENNRPIGLKK TLVFYSGKAP KGVRSSWIMN  180
EYRLPPADTD RYHKTEISLC RVYKRTGIDD GHGHVSTARS SAHSRGGGAA PVQDNKQGSS  240
STSTPTPPPT PSKLHLLSSE CTSPPAIVTD HAAMAAHKAP SPRHHQQQQQ QLHAAKPCGG  300
YLQNSSMASA AGGDQQQQFQ QDFAAALYQQ YSKNTSGAFA STYSLLNLVN AASMGSSAAA  360
IDELSSLVGH GTPSYINPAA GSHNYSQFLH LPTTPSSHQP TPAPLGTTTA AAAATLPMSL  420
AAFSDRIWDW NNPIPEAGGR DYSTSTGFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-101	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G44090.1