PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G40860.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 208aa    MW: 22274.5 Da    PI: 7.9173
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G40860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.81.9e-32359258
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
                      Dgy+WrKYGqK++k++++prsYY+Cts++C++kk+ve+s++dp+++++tYeg+H+h
  OGLUM01G40860.1  3 ADGYKWRKYGQKSIKNNPHPRSYYKCTSSRCSAKKHVEKSTDDPEMLIVTYEGSHHH 59
                     6*******************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MPADGYKWRK YGQKSIKNNP HPRSYYKCTS SRCSAKKHVE KSTDDPEMLI VTYEGSHHHG  60
PQPLFPPHIA QPPPPTSVVG FSAASGAGPP PSSPAAAARK RKNYVRAAFS PTTSEDDGDG  120
AGRLRPEWPQ DDGTSCDVAE LRRRGDAEHA APRRVATDRS CDDGGGGGST SASSSVARAD  180
AATALSSDSP PTIWSCLDWP WSQETLFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.19e-25WRKY family protein