PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G40820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | GRAS | ||||||||
Protein Properties | Length: 923aa MW: 101617 Da PI: 6.9994 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 388 | 1.1e-118 | 547 | 916 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 ++lL++cA+ v+++d + a++lL++++++a +gd qRla++f+++L+arla+++s++yk + ++ + +++l+a++l+ ++P+ k+sh OGLUM01G40820.1 547 ETLLIHCAQSVATDDRRSATELLKQIRQHAHANGDGDQRLAHCFANGLEARLAGTGSQIYKNYTITRLP---CTDVLKAYQLYLAACPFKKISH 637 789************************************************************999999...9********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187 aNq+Il+ave++++vHi+D++i +G+QWp+L+q L++Rp+gpp+lRiTg++ p++g +e++eetg+ L+++A++++vpfef++ +a+r+e OGLUM01G40820.1 638 YFANQTILNAVEKAKKVHIVDYGIYYGFQWPCLIQRLSNRPGGPPKLRITGIDTPQPGfrPAERTEETGRYLSDYAQTFNVPFEFQA-IASRFE 730 ***************************************************************************************.7***** PP GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281 ++++e+L+++++E+l+Vn++++ ++l+desv es+r+ Lk++++++P+v+++ + ++n++ F++rf eal +ysa+fd+le+++p+++e+ OGLUM01G40820.1 731 AVRMEDLHIEEDEVLIVNCMFKFKNLMDESVVAESPRNMALKTIRKMNPHVFIHGVVNGSYNAPFFVTRFREALFHYSAIFDMLETNIPKDNEQ 824 ********************************************************************************************** PP GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 r +E +l++re+ nv++ceg er er et+++W+ r ++aGFk++pl+++++k a+ +r +++d + ++e++ +l++gWk+r L+++S W+ OGLUM01G40820.1 825 RLLIESALFSREAINVISCEGLERMERPETYKQWQVRNQRAGFKQLPLNQDMMKRAREKVRCYHKD-FIIDEDNRWLLQGWKGRILFALSTWK 916 ****************************************************************77.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 923 aa Download sequence |
MPNLICLQLH AAITPIWLES PSCSIRQTVK VSTTTTNVPV INNPVYGHGP PPAHSSRPRR 60 PLALVPRTFP TAQPLSVNPP ASHLRGRGPG AGKVSTLRLR ERIASVLIVG ERLGPGQPAP 120 LENTGPPPFP SPLGSLISPF VSLVSLPPQQ MVMDAGVHDV CTMLPGSKRD AHLPLPIYPQ 180 IAAANGFATA EEFDPLLFLS PDAVCGGGGG DYLNIVSAQP ISAASTNGAS PPRDVSVSAS 240 AASSAAAQHD DSEAFSDIVL GYINRMLMAE DIDEKFEHYP VNADDLLAAE KPFLEILADQ 300 SPYSGGSSVE SPDGSSAANS CNSLSPCNCS SSSDGLGAVP QTPVLEFPTA AFSQTPQLYG 360 DLIPTGGMVE SGGAWPYDPT EFYQLQTKPN QQALQFRRGF QEASKFLPDE SKLVIDVDKL 420 YSGDEGSRFL GEVRQEKKLV KVKTETSDVE SAGHRGKKHF YGDDLDAEEG RCSKHSAQGI 480 DTDHLVRDLM DKVLLCNGET CSKGVKELRE ALQHDVAKHS GGGHGKGSSH GKGRGKKQPK 540 KEVVDLETLL IHCAQSVATD DRRSATELLK QIRQHAHANG DGDQRLAHCF ANGLEARLAG 600 TGSQIYKNYT ITRLPCTDVL KAYQLYLAAC PFKKISHYFA NQTILNAVEK AKKVHIVDYG 660 IYYGFQWPCL IQRLSNRPGG PPKLRITGID TPQPGFRPAE RTEETGRYLS DYAQTFNVPF 720 EFQAIASRFE AVRMEDLHIE EDEVLIVNCM FKFKNLMDES VVAESPRNMA LKTIRKMNPH 780 VFIHGVVNGS YNAPFFVTRF REALFHYSAI FDMLETNIPK DNEQRLLIES ALFSREAINV 840 ISCEGLERME RPETYKQWQV RNQRAGFKQL PLNQDMMKRA REKVRCYHKD FIIDEDNRWL 900 LQGWKGRILF ALSTWKPDNR SSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 1e-180 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G40820.1 |