PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G39020.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 316aa    MW: 35060.7 Da    PI: 8.7319
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G39020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.42.8e-53191461128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lppGfrFhPtdeelvv+yL++kv++++l++  +i+evd+yk++PwdLp+k+  ++kewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v  
  OGLUM01G39020.1  19 LPPGFRFHPTDEELVVHYLCRKVARQPLPV-PIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAP 111
                      79****************************.88***************8877899**************************************9 PP

              NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      k + ++vg+kk Lvfy+g+ap+g+ktdW+mheyrl
  OGLUM01G39020.1 112 KgSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRL 146
                      866778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MAAAVGGSGR RDAEAELNLP PGFRFHPTDE ELVVHYLCRK VARQPLPVPI IAEVDLYKLD  60
PWDLPEKALF GRKEWYFFTP RDRKYPNGSR PNRAAGRGYW KATGADKPVA PKGSARTVGI  120
KKALVFYSGK APRGVKTDWI MHEYRLADAD RAPGGKKGSQ KLDEWVLCRL YNKKNNWEKV  180
KLEQQDVASV AAAAPRNHHH QNGEVMDAAA ADTMSDSFQT HDSDIDNASA GLRHGGCGGG  240
GFGDVAPPRN GFVTVKEDND WFTGLNFDEL QPPYMMNLQH MQMQMVNPAA AGHDGGYLQS  300
ISSPQMKMWQ TILPPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-86NAC family protein