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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G36040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | TCP | ||||||||
Protein Properties | Length: 296aa MW: 31007.5 Da PI: 7.5016 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 96.1 | 6.6e-30 | 55 | 139 | 3 | 93 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaks 93 g+kdrhsk+ T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++a ++i++l+ ++++++ + ++++++ ++a++ OGLUM01G36040.1 55 GGKDRHSKVKTVKGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEIDKLPPLQFPPQDHL------CMGHHHHLPSAMPL 139 78*************************************************************99999443......34443443333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MILGSNQAAA AAAAAAAAEE EAAELARKHT AAVATSRQWS AQTESRIVRV SRVFGGKDRH 60 SKVKTVKGLR DRRVRLSVPT AIQLYDLQDR LGLNQPSKVV DWLLNAARHE IDKLPPLQFP 120 PQDHLCMGHH HHLPSAMPLM HHHGHHHHAD DDKYHVAAAA AGGGGGGGGD DVDGGGGGGA 180 AHIVGRFPAG GYHRFMGLNN PLGMVNSAAG AAMPFHYAGE SWNNGSVQDS GAGSPQVAAA 240 AAHHTSPFPS LLSLAPGPHH QLVFYSSEAE QFTVDNLGSQ GLSLSSARAF HDQTGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02150.1 | 4e-41 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G36040.1 |