PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G29330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB_related | ||||||||
Protein Properties | Length: 91aa MW: 10417.5 Da PI: 7.6787 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.5 | 3e-08 | 20 | 64 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W++ E +l+ +a + +G g +++++r mg ++t+ +++ ++ OGLUM01G29330.1 20 EWSKKENKLFEEALAYYGEGapdLFHKVSRAMGGTKTADEVRRHY 64 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence |
MSSRSSSSSR NSNSVNMDSE WSKKENKLFE EALAYYGEGA PDLFHKVSRA MGGTKTADEV 60 RRHYEILEDD LKLIEARRVP FPKYNTQGAW N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 6e-21 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G29330.1 |