PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G26760.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB_related | ||||||||
Protein Properties | Length: 89aa MW: 10259.5 Da PI: 6.5152 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.3 | 5.5e-11 | 33 | 74 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +T+eE +l + +++ G++ W++Ia +++ gRt+k++ +w +y OGLUM01G26760.1 33 FTEEEKDLVFRMHRLVGNR-WELIAGRIP-GRTAKEVEMFWAQY 74 9******************.*********.********999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence |
MDSSSGSQGK NSKTSDGCET KEVNNTAQNF VHFTEEEKDL VFRMHRLVGN RWELIAGRIP 60 GRTAKEVEMF WAQYTGGEIW CLETFPRRM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01060.1 | 6e-21 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G26760.1 |