PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G24040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 178aa MW: 19723 Da PI: 10.2656 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27 | 8.3e-09 | 10 | 48 | 3 | 32 |
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C.......... CS HLH 3 rahnerErrRRdriNsafeeLrellPk.as........k 32 ++h + ErrRR+++N+ f L++l+P+ + OGLUM01G24040.1 10 KNHVMSERRRREKLNEMFLILKSLVPSiDKelerrvqeL 48 5899**********************9775555555553 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MNRAAGSSIK NHVMSERRRR EKLNEMFLIL KSLVPSIDKE LERRVQELES GKKVSRPPKR 60 KPCSETIIGG GGGSGAGAVK EHHHWVLSES QEGTPSDVRV IIMDKDELHL EVHCRWKELM 120 MTRLFDAIKS LRLDILSVQS SVPDGLLGLK IRAKYASSAA VAPAMISETL RTAVAAKC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 16 | 21 | ERRRRE |
2 | 17 | 22 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41315.1 | 5e-17 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G24040.1 |