PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G19440.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 334aa MW: 37506.8 Da PI: 7.0008 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 178.6 | 1.7e-55 | 14 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdee++++yL++kv +++ + +i evd++k+ePwdLp k+ ++ekewyf++++d+ky+tg r+nrat++gyWkatgkdke++ OGLUM01G19440.1 14 LPPGFRFHPTDEEIITFYLAPKVVDSRGFCVAAIGEVDLNKCEPWDLPgKAKMNGEKEWYFYCQKDRKYPTGMRTNRATEAGYWKATGKDKEIF 107 79********************99999556588***************544445788************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ l+g+kktLvfykgrapkg kt+Wvmheyrl OGLUM01G19440.1 108 RNHHMLIGMKKTLVFYKGRAPKGDKTNWVMHEYRL 142 *********************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MGEQQQQVER QPDLPPGFRF HPTDEEIITF YLAPKVVDSR GFCVAAIGEV DLNKCEPWDL 60 PGKAKMNGEK EWYFYCQKDR KYPTGMRTNR ATEAGYWKAT GKDKEIFRNH HMLIGMKKTL 120 VFYKGRAPKG DKTNWVMHEY RLADASPPQP PPPPSSAEPP RQDDWAVCRI FHKSSGIKKP 180 VPVPMQMPMQ MQMPVAHQVP AANYQQQMAM ASASIIQVPM QMQMPSMSDQ LQMLDDFSTG 240 SLMAPPPPPP SYSTLPGFPL QINGGAQQFV GNPSMYYHHH QQQQQQQQMD MAAGGFVVSE 300 PSSLVVSPQD AADQNNAADI SSVACNMDAT IWKY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.2 | 3e-78 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G19440.1 |