PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G15940.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 567aa    MW: 60425.6 Da    PI: 5.6605
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G15940.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.93.3e-22361851127
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk..............kvkaeek.ewyfFskrd..kkyatgkrkn 75 
                      +p+G+ F P+d el    L+ k+ +++    l++v+++++i++++P   p                + +ee+  +yfFs+r+  +k+++++r++
  OGLUM01G15940.1  36 MPVGCYFVPKDLELFAI-LRCKLVRSQlpGALNNVFEHIRILEFHPPASPPplylslspfinhqtYIGNEEDgYIYFFSRRQfvTKARNKRRPT 128
                      699************66.666655555233445679999******99887346788999998765333344435699999983345668999** PP

              NAM  76 ratksgyWkatgkdkevlsk..kgelvglkktLvfy...kgrapkgektdWvmheyr 127
                      r++k g+Wka+g +k++ sk  +g +vg k t+vfy    + ++++ kt+W mhe++
  OGLUM01G15940.1 129 RVAKGGTWKASGGSKTLRSKkvGGIDVGQKLTMVFYerrFEGDQNPIKTNWSMHEFT 185
                      *****************998888899**********43313456678********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    
MAEQPLGGGG GDGNNNGKWK GKEKVVPEYG KNRHGMPVGC YFVPKDLELF AILRCKLVRS  60
QLPGALNNVF EHIRILEFHP PASPPPLYLS LSPFINHQTY IGNEEDGYIY FFSRRQFVTK  120
ARNKRRPTRV AKGGTWKASG GSKTLRSKKV GGIDVGQKLT MVFYERRFEG DQNPIKTNWS  180
MHEFTKIIDG SKNQEGGRRT GERCRRGVEH GRALHVVGTA TSYATAAIAG HGRTIISNAA  240
TATAIAGHGR TIVINAATAT AIAGLGRIVV GDVATTATAI AGPGRIVVCD VAACQQMPGM  300
AGSSSAMPLP LSLPGLAGGM MSMADQANMA STSQASTPSS ELLQDWYDEF EITYGAVAPP  360
SPSTISWEAP QSSPTGWWPS PNGEPVQHDG YLGMAANPTS YMLEHPLPTA AIPPEPMTPP  420
TSSPAPPPAV DNHHRLSPPH DAAGSNYNHP ELAGYNGGVQ AQHEHQHQPQ ELQPALLVDG  480
EDGYGAIADG DGDTQLGVAE LDTERIAEMV NHIMDGEFEF KFEDNTVLKY NEVFPDDDKV  540
VAAPMMIDGG GDGDGADGGD GGDPFDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.16e-09NAC family protein