PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G06520.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | Dof | ||||||||
Protein Properties | Length: 222aa MW: 22965.3 Da PI: 9.6214 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121.2 | 3.6e-38 | 33 | 87 | 4 | 58 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrkn 58 + l+cprC+stntkfCyynny+l+qPr+fCkaCrryWt+GGalrnvPvGgg+r++ OGLUM01G06520.1 33 EGLACPRCESTNTKFCYYNNYNLAQPRHFCKACRRYWTRGGALRNVPVGGGTRNK 87 6789*************************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MLLMEVAEGR TVAAAATAAG GGGLGGGART EAEGLACPRC ESTNTKFCYY NNYNLAQPRH 60 FCKACRRYWT RGGALRNVPV GGGTRNKVAP APCTGRRKRA GHATHAAAPT TTTQAPAVSS 120 APLPLMPPAV AYELPFLPPP PPLPLTAVDP DRRLLDLGGS FTSLLAPAQL HNGHFTTGFL 180 LGTMSSPPPP PPPATSAPSP APAAHPPVSD SIWAMGWPHL SI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21270.1 | 4e-31 | Dof family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G06520.1 |