PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G05840.2
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 307aa    MW: 32212.1 Da    PI: 10.8115
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G05840.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.31e-10203224122
                      ---SS-EEEEEEE--TT-SS-E CS
             WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                      ldDgy+WrKYGqK+vk++++pr
  OGLUM01G05840.2 203 LDDGYKWRKYGQKVVKNTQHPR 224
                      59*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MFPSPGRAVM ALGHHGAARQ PPTTMAAAAS SSTTSAAAAP ATATTTVAFS FQHPTPTPSH  60
HHHHHGVLGY SSLVLDHHHP TTAAASSHAP SPPTLHHHHG GGLHAAAPPP RSSPPHPWSC  120
EEGDHRGRPQ MGNKGEAAAA MGAMGINDAG NNTAAAAAAQ HHLGVGAVRM KKVGGGGGGG  180
GKARRKVREP RFCFKTMSDV DVLDDGYKWR KYGQKVVKNT QHPRPSPSTH ASHLPPRGQL  240
VASVDACGPS DADRIFPLRS TARETRSREN INSSDLMDLS AIAIAHCIST KQPNHKVGAS  300
RERKKER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.12e-18WRKY family protein