PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G00630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 221aa MW: 23802.8 Da PI: 9.8379 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.5 | 5.6e-09 | 37 | 105 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...................TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.as................kapskKlsKaeiLekAveYIksLq 55 + +E++RR +++ +L +l+P a+ + +++ ++ + Le+A YIk+L+ OGLUM01G00630.1 37 ERKDVEKNRRLHMKGLCLKLSSLIPAaAPrrhhhhystsssssppSSTKEAVTQLDHLEQAAAYIKQLK 105 56899*********************555**************76666666****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MKSRKNSTTS TKAAGSCHTS SSGGGGNCYS SSSSKMERKD VEKNRRLHMK GLCLKLSSLI 60 PAAAPRRHHH HYSTSSSSSP PSSTKEAVTQ LDHLEQAAAY IKQLKGRIDE LKKRKQQAAA 120 LTTSTSNGGG GGGMPVVEVR CQDGTLDVVV VSEAIGEERE RAVRLHEVIG VLEEEGAEVV 180 NASFSVVGDK IFYTLHSQAL CSRIGLDASR VSHRLRNLLQ Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10585.1 | 2e-18 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G00630.1 |