PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G00330.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 337aa    MW: 37469.7 Da    PI: 6.5732
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G00330.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.75.6e-50231541128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                      lppGfrFhPtdeel+ +yL k++++ ++++  vi+evdiyk++Pw+Lp +  + +++ ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++
  OGLUM01G00330.1  23 LPPGFRFHPTDEELLLHYLGKRAAAAPCPA-PVIAEVDIYKYNPWELPaMaVFGESDGEWYFFSPRDRKYPNGVRPNRAAGSGYWKATGTDKPI 115
                      79***************************9.89***************5334455666************************************ PP

              NAM  93 lskkgel...vglkktLvfykgrapkgektdWvmheyrl 128
                        +++++    g+kk Lvfy+gr pkg+kt+W+mheyrl
  OGLUM01G00330.1 116 SISETQQtvlLGVKKALVFYRGRPPKGTKTSWIMHEYRL 154
                      99844444559**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MTIDLQLPAA ACGDHHTAAG AGLPPGFRFH PTDEELLLHY LGKRAAAAPC PAPVIAEVDI  60
YKYNPWELPA MAVFGESDGE WYFFSPRDRK YPNGVRPNRA AGSGYWKATG TDKPISISET  120
QQTVLLGVKK ALVFYRGRPP KGTKTSWIMH EYRLANAASS YTSNMKQLAS SSSSSSSSAS  180
MRLDEWVLCR IYKKKEANQQ LQHYINMMMD DDNDDEHNLQ VQQQQQQAQS HRMPRPPSIS  240
DYLLDYSDDL PPSTDQTPSL HLGFTAVNEG SSNNNKRHKT MEEYYSISIS TAEMLHASSS  300
TSNNKSTQIN FSSIFEPQTP AAAGHQLMSS HNDDTSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.17e-72NAC family protein