PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI93347.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YC
Protein Properties Length: 68aa    MW: 7656.69 Da    PI: 5.6128
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI93347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC574.5e-1814162102
       NF-YC  62 swlhaeenkrrtlkksdiaaavtrtdifdflvdivprdelk 102
                 sw+h+eenkrrtl+k++iaaa+++tdi+dflvdivprd+lk
  MCI93347.1   1 SWNHTEENKRRTLQKNNIAAAIAKTDIYDFLVDIVPRDDLK 41 
                 8*************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    
SWNHTEENKR RTLQKNNIAA AIAKTDIYDF LVDIVPRDDL KDEVLASIPR GTMHVGGPAD  60
ALPYCYMP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11016RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.38e-31NF-YC family protein