PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI90055.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YA
Protein Properties Length: 48aa    MW: 5889.98 Da    PI: 11.2899
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI90055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA51.82.7e-161448136
   CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36
                +ep+YVN+KQy++I++RRq Rakle+++kl +k+rk
  MCI90055.1 14 EEPIYVNPKQYHAIMRRRQYRAKLEAHNKL-IKNRK 48
                69****************************.88887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 48 aa     Download sequence    
MAPVRIPLPR DLHEEPIYVN PKQYHAIMRR RQYRAKLEAH NKLIKNRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.11e-16NF-YA family protein