PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI65507.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 84aa    MW: 9407.8 Da    PI: 5.5669
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI65507.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS121.41.1e-3718491178
        GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
                 +kf+h+taNqaI ea+e eervH+iD+di qG QWpa++qaLa+R++g+p lRiTgvg+      e+++etg+ L+++A++l++pfef
  MCI65507.1   1 IKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARSGGAPFLRITGVGP----CIESVRETGRCLTELAHSLRIPFEF 84 
                 69*********************************************************....************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
IKFAHFTANQ AIFEAFEAEE RVHVIDLDIL QGYQWPAFMQ ALAARSGGAP FLRITGVGPC  60
IESVRETGRC LTELAHSLRI PFEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.16e-31GRAS family protein