PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI58906.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | HB-other | ||||||||
Protein Properties | Length: 72aa MW: 8091.09 Da PI: 4.6414 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.6 | 1.2e-09 | 30 | 71 | 3 | 44 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqV 44 k+++++ eq+++Le+ Fe +++ e++ +LA+ l+L+ rqV MCI58906.1 30 KKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALNLQPRQV 71 456899***********************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 72 aa Download sequence |
MSFSSGIELG EEANIAEEDL SDDGSQAGEK KRRLNMEQVK TLEKSFELGN KLEPERKMQL 60 ARALNLQPRQ VA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 3e-31 | HD-ZIP family protein |