PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI57839.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family LBD
Protein Properties Length: 91aa    MW: 9626 Da    PI: 8.4982
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI57839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260113.21.7e-35691185
      DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85
                +C aCk+lrrkC+ +C++apyf  +q +++fa+vhk+FGasnv+kll+++++++r++a+++++yeA+ar++dPvyG+v++i +lqq
  MCI57839.1  6 PCGACKFLRRKCSGGCIFAPYFGTDQgAASFAAVHKVFGASNVSKLLSSISTNHRHEAAATIFYEAQARLSDPVYGCVSTIIALQQ 91
                7***********************9989******************************************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
ESVVPPCGAC KFLRRKCSGG CIFAPYFGTD QGAASFAAVH KVFGASNVSK LLSSISTNHR  60
HEAAATIFYE AQARLSDPVY GCVSTIIALQ Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03760.13e-49LBD family protein