PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI57839.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | LBD | ||||||||
Protein Properties | Length: 91aa MW: 9626 Da PI: 8.4982 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 113.2 | 1.7e-35 | 6 | 91 | 1 | 85 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85 +C aCk+lrrkC+ +C++apyf +q +++fa+vhk+FGasnv+kll+++++++r++a+++++yeA+ar++dPvyG+v++i +lqq MCI57839.1 6 PCGACKFLRRKCSGGCIFAPYFGTDQgAASFAAVHKVFGASNVSKLLSSISTNHRHEAAATIFYEAQARLSDPVYGCVSTIIALQQ 91 7***********************9989******************************************************9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence |
ESVVPPCGAC KFLRRKCSGG CIFAPYFGTD QGAASFAAVH KVFGASNVSK LLSSISTNHR 60 HEAAATIFYE AQARLSDPVY GCVSTIIALQ Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03760.1 | 3e-49 | LBD family protein |