PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI53670.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 49aa    MW: 5625.4 Da    PI: 4.8575
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI53670.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.81.5e-17349148
         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                lppGfrFhPtdeel+++yL +kv+++++++ ++i ev ++k+ePwdLp
  MCI53670.1  3 LPPGFRFHPTDEELISHYLLRKVTDTNFSA-KAIGEVVLNKSEPWDLP 49
                79***************************9.89**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 49 aa     Download sequence    
MDLPPGFRFH PTDEELISHY LLRKVTDTNF SAKAIGEVVL NKSEPWDLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.18e-26NAC family protein