PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI53670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 49aa MW: 5625.4 Da PI: 4.8575 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.8 | 1.5e-17 | 3 | 49 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 lppGfrFhPtdeel+++yL +kv+++++++ ++i ev ++k+ePwdLp MCI53670.1 3 LPPGFRFHPTDEELISHYLLRKVTDTNFSA-KAIGEVVLNKSEPWDLP 49 79***************************9.89**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 49 aa Download sequence |
MDLPPGFRFH PTDEELISHY LLRKVTDTNF SAKAIGEVVL NKSEPWDLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 8e-26 | NAC family protein |