PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI52204.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 98aa MW: 11019.6 Da PI: 4.0775 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 82.4 | 8e-26 | 2 | 95 | 109 | 208 |
GRAS 109 eervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlv 207 +e+vH+iDfdi++G+QWp+L +a R++ + slR+T+++ +++s+ ++++tg+rL++fA++++ pf f+++++ + edl+ eL g +l+Vn++ MCI52204.1 2 AEQVHVIDFDIMEGIQWPPLVVDFAMRKN-TTSLRVTAIAM-DQQSAASVQQTGRRLNEFADSINFPFVFDTMMMVSDEDLQGIEL----GGTLIVNCM 94 689************************65.59********9.6689**************************86666666665555....999****99 PP GRAS 208 l 208 + MCI52204.1 95 I 95 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence |
GAEQVHVIDF DIMEGIQWPP LVVDFAMRKN TTSLRVTAIA MDQQSAASVQ QTGRRLNEFA 60 DSINFPFVFD TMMMVSDEDL QGIELGGTLI VNCMIHQW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G08250.1 | 7e-17 | GRAS family protein |