PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI52204.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 98aa    MW: 11019.6 Da    PI: 4.0775
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI52204.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS82.48e-26295109208
        GRAS 109 eervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlv 207
                 +e+vH+iDfdi++G+QWp+L   +a R++ + slR+T+++  +++s+ ++++tg+rL++fA++++ pf f+++++ + edl+  eL    g +l+Vn++
  MCI52204.1   2 AEQVHVIDFDIMEGIQWPPLVVDFAMRKN-TTSLRVTAIAM-DQQSAASVQQTGRRLNEFADSINFPFVFDTMMMVSDEDLQGIEL----GGTLIVNCM 94 
                 689************************65.59********9.6689**************************86666666665555....999****99 PP

        GRAS 208 l 208
                 +
  MCI52204.1  95 I 95 
                 7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
GAEQVHVIDF DIMEGIQWPP LVVDFAMRKN TTSLRVTAIA MDQQSAASVQ QTGRRLNEFA  60
DSINFPFVFD TMMMVSDEDL QGIELGGTLI VNCMIHQW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.17e-17GRAS family protein