PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI49958.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 60aa MW: 6994.18 Da PI: 11.507 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 73.7 | 4.7e-23 | 2 | 53 | 75 | 127 |
NAM 75 nratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +r+t++g+Wkatg+d++++s +g +g+kktLvfy+grap+g++t+W+mheyr MCI49958.1 2 KRKTNRGFWKATGHDRKIKS-GGISIGMKKTLVFYSGRAPNGKRTNWLMHEYR 53 799*****************.*******************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 60 aa Download sequence |
MKRKTNRGFW KATGHDRKIK SGGISIGMKK TLVFYSGRAP NGKRTNWLMH EYRPTLKELD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G35580.3 | 1e-26 | NAC family protein |