PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI47128.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | FAR1 | ||||||||
Protein Properties | Length: 106aa MW: 12125.7 Da PI: 10.513 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 81.9 | 1.1e-25 | 26 | 105 | 2 | 78 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwev 78 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r++tr+gCka+l vk+++ +gkw v MCI47128.1 26 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTVTRVGCKASLSVKMHDsSGKWIV 105 ****************************************998888545677889*****************99****98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence |
VYFPEAGDLE PSEGMEFESE EAAKAFYNSY ARRVGFSTRV SSSRRSRRDG AIIQRQFVCA 60 KEGFRNLNEK RTKDREIKRP RTVTRVGCKA SLSVKMHDSS GKWIVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-35 | FAR1 family protein |