PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI42230.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | C2H2 | ||||||||
Protein Properties | Length: 115aa MW: 11954.1 Da PI: 8.7823 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.4 | 0.00023 | 1 | 23 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k Fs+ L H +H MCI42230.1 1 HKCSVCNKAFSSYQALGGHKASH 23 79**********99999998887 PP | |||||||
2 | zf-C2H2 | 11.1 | 0.0013 | 58 | 77 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C+ksF++ L H MCI42230.1 58 HECSICHKSFPTGQALGGHK 77 79*********988887766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence |
HKCSVCNKAF SSYQALGGHK ASHRKSAVMS TAEDHQTTTT SSAVTTSSAA SNGKIKSHEC 60 SICHKSFPTG QALGGHKRCH YEGGAGGGNS TVTASEVGSS HSHHRDFDLN LPAFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 8e-33 | C2H2 family protein |