PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI40949.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YC
Protein Properties Length: 99aa    MW: 10984.5 Da    PI: 9.0705
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI40949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC77.12.3e-244799150
       NF-YC  1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllska 50
                ql++fw++q   iek+tdfknh+lPlarikki+kadedv+misaeaPv++++a
  MCI40949.1 47 QLQAFWANQyqeIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARA 99
                89******99999**************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MTGAPGSVVT SVGGMQSTGQ PAGAQLGQHQ LAYQHIHQQQ QQQLQQQLQA FWANQYQEIE  60
KVTDFKNHSL PLARIKKIMK ADEDVRMISA EAPVIFARA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.31e-23NF-YC family protein