PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI40949.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NF-YC | ||||||||
Protein Properties | Length: 99aa MW: 10984.5 Da PI: 9.0705 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 77.1 | 2.3e-24 | 47 | 99 | 1 | 50 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllska 50 ql++fw++q iek+tdfknh+lPlarikki+kadedv+misaeaPv++++a MCI40949.1 47 QLQAFWANQyqeIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARA 99 89******99999**************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 99 aa Download sequence |
MTGAPGSVVT SVGGMQSTGQ PAGAQLGQHQ LAYQHIHQQQ QQQLQQQLQA FWANQYQEIE 60 KVTDFKNHSL PLARIKKIMK ADEDVRMISA EAPVIFARA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 1e-23 | NF-YC family protein |