PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI40150.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 120aa    MW: 13606.2 Da    PI: 9.975
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI40150.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.52.8e-1455101455
                 HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 +h e+Er+RR+++N++f  Lr ++P+ +      K++Ka+ L  A+ YI++Lq
  MCI40150.1  55 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAISYINELQ 101
                 799***********************66......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
FSGATSRPSV RSIVGESELS DVEASCREDK PSPSDDRRPR KRGRKPANGR EEPLNHVEAE  60
RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAISYINEL QAKLKMMESE REQFGSTSKD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13745RRPRKRGRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46760.15e-37bHLH family protein