PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI39431.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family LBD
Protein Properties Length: 99aa    MW: 11663.4 Da    PI: 9.6337
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI39431.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26061.52.2e-198901799
      DUF260 17 vlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
                 la+ f  ++p+ f++vhk+FG+s+v+kll++++ ++r++a++slvye ear+r+ v+  + ++++l+++l++++++++ lk+
  MCI39431.1  8 ELAQFFSPDNPQLFKVVHKVFGRSTVSKLLRKIDSTQRKKAVDSLVYEVEARLRNHVNDFMDFVHNLEHRLKEVQQKIDNLKS 90
                6899*************************************************************************998876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MSCFLVVELA QFFSPDNPQL FKVVHKVFGR STVSKLLRKI DSTQRKKAVD SLVYEVEARL  60
RNHVNDFMDF VHNLEHRLKE VQQKIDNLKS EQTKYLSPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66870.12e-25LBD family protein