PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI37807.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 117aa    MW: 12960.2 Da    PI: 8.6684
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI37807.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.63.9e-0798117120
                 --S---SGGGGTS--TTTTT CS
     zf-CCCH   1 yktelCrffartGtCkyGdr 20 
                 y   +C+++ +tG+C yGd+
  MCI37807.1  98 YQPDICKDYKETGYCGYGDS 117
                 67789*************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
KEIQVQHDSK ATATLETETD FSNDARAMRE RALKQASETL KGKGTGSEDG KLYKGMNNYK  60
DHKAGFRREH TISGEKAGGS HGPLRASAHI RVSARFDYQP DICKDYKETG YCGYGDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.12e-65C3H family protein