PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI37261.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 87aa MW: 10562.5 Da PI: 11.1291 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 23.5 | 7.1e-08 | 10 | 31 | 2 | 23 |
---SHHHHHHHHHHHHHHHHHH CS SRF-TF 2 rienksnrqvtfskRrngilKK 23 +i+++ r+vt+ kR++g++KK MCI37261.1 10 FISDELARKVTYNKRKKGLIKK 31 89*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 87 aa Download sequence |
MPRRKIKLAF ISDELARKVT YNKRKKGLIK KGAVKVIERY QNSYMRDEKR NVTQERFTMQ 60 MITKATDQIR KMKHDNRENE LNLLMFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26630.1 | 1e-07 | M-type_MADS family protein |