PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI37261.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family M-type_MADS
Protein Properties Length: 87aa    MW: 10562.5 Da    PI: 11.1291
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI37261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF23.57.1e-081031223
                ---SHHHHHHHHHHHHHHHHHH CS
      SRF-TF  2 rienksnrqvtfskRrngilKK 23
                +i+++  r+vt+ kR++g++KK
  MCI37261.1 10 FISDELARKVTYNKRKKGLIKK 31
                89*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MPRRKIKLAF ISDELARKVT YNKRKKGLIK KGAVKVIERY QNSYMRDEKR NVTQERFTMQ  60
MITKATDQIR KMKHDNRENE LNLLMFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26630.11e-07M-type_MADS family protein