PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI36643.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | GeBP | ||||||||
Protein Properties | Length: 111aa MW: 11529.1 Da PI: 10.9629 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 37.6 | 6.2e-12 | 68 | 109 | 5 | 46 |
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksis 46 r++seeDe+++L+G+ df +ktgk+p ++i af+ fvkks+ MCI36643.1 68 RIFSEEDELAILRGVADFLSKTGKDPLKNIAAFHGFVKKSLG 109 9**************************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 111 aa Download sequence |
PPSNTKLKPL ASKPIKAQPQ VQSSAQAQTT PKSGKKRVAD DINANGNTIK RSKGKETVSA 60 AAGGSGGRIF SEEDELAILR GVADFLSKTG KDPLKNIAAF HGFVKKSLGA T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G61730.1 | 3e-12 | GeBP family protein |