PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI35299.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | SBP | ||||||||
Protein Properties | Length: 103aa MW: 11267 Da PI: 9.1529 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 72.4 | 8.1e-23 | 57 | 103 | 1 | 47 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs 47 +Cqv+gC++ l +akeyhrrhkvCe+hskap+v+v gleqrfCqqCs MCI35299.1 57 RCQVDGCHVALMNAKEYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCS 103 6*********************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 103 aa Download sequence |
MPDPHLTCLK LGKRHYFEDV NGGXXXXXXX XGDKRGKGYC GGGGKVAAAA ASFAVARCQV 60 DGCHVALMNA KEYHRRHKVC EMHSKAPKVV VLGLEQRFCQ QCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27370.3 | 4e-23 | SBP family protein |