PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI34756.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 126aa    MW: 14148.5 Da    PI: 5.263
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI34756.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.33.1e-06101123123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C+k Fs++  +  H++ H
  MCI34756.1 101 FPCHYCDKKFSSPQAFGGHQNAH 123
                 89**************9999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
RNLKHKIEEK PEPIFEKEPN VIPPSSQSDV EDIVTRRLDI CTKSTSKPLE IGEHSSSSQN  60
ATGELSSQNT TGEPSYKNAT DDIISRNATD EPLPEQEVRE FPCHYCDKKF SSPQAFGGHQ  120
NAHKRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14010.18e-10C2H2 family protein