PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI33390.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 98aa MW: 11127.5 Da PI: 4.7392 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 50.1 | 5e-16 | 11 | 84 | 303 | 374 |
GRAS 303 aerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374 +++re +e +ekW er++eaGF ++e+a + ++llrk++ +++++veee+ + v l Wk++p+ ++S W+ MCI33390.1 11 TNQREMNEGKEKWCERMKEAGFAGEVFGEDAIDGGRALLRKYDnNWEMKVEEENSTTVgLWWKGQPVSFCSLWK 84 5678999************************************9999******999999**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence |
MMEGEAAKAL TNQREMNEGK EKWCERMKEA GFAGEVFGED AIDGGRALLR KYDNNWEMKV 60 EEENSTTVGL WWKGQPVSFC SLWKLDKQSS SSSTLTAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13840.1 | 1e-33 | GRAS family protein |