PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI31998.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 59aa    MW: 6838.06 Da    PI: 8.5137
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI31998.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.98.5e-191359148
         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                lppGfrFhPtdeelvv+yLk+kv + +l++ ++i++vd++k++PwdLp
  MCI31998.1 13 LPPGFRFHPTDEELVVQYLKRKVFSLPLPA-SIIPQVDLCKSDPWDLP 59
                79****************************.89**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 59 aa     Download sequence    
MMNFVKKNGE VRLPPGFRFH PTDEELVVQY LKRKVFSLPL PASIIPQVDL CKSDPWDLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.22e-28NAC family protein