PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI31727.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 124aa MW: 14574.8 Da PI: 8.9371 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 42 | 2.8e-13 | 5 | 119 | 2 | 116 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 p G+ F Ptde lv +yL++k ++k + + i e+d+y ++P d+p + +++ ++++ f++ + k ++ r ksg+ ++ + ++ +s + MCI31727.1 5 PLGVGFLPTDEILVGYYLANKNSEKVqvSNGYDLIIELDLYAYDPFDFPyTlFYYTIKNQLQFYCFTGKVD----EEMRHCKSGFRMKKKHVRDNTSVG 99 78*******************9999855444578***************5353344456777777776654....567888899988888888888856 PP NAM 97 gelvglkktLvfykgrapkg 116 + + k+ + fy g+ pk+ MCI31727.1 100 NVVLEKKTLFNFYIGNFPKT 119 65555566668998877664 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence |
MYMRPLGVGF LPTDEILVGY YLANKNSEKV QVSNGYDLII ELDLYAYDPF DFPYTLFYYT 60 IKNQLQFYCF TGKVDEEMRH CKSGFRMKKK HVRDNTSVGN VVLEKKTLFN FYIGNFPKTA 120 SRTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22290.1 | 1e-08 | NAC family protein |