PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI31423.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 107aa    MW: 10926.5 Da    PI: 9.1682
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI31423.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.63.2e-061131527
                -TTTTT-SS-SSS CS
     zf-CCCH 15 CkyGdrCkFaHgp 27
                Ck+G +CkF+H++
  MCI31423.1  1 CKFGVTCKFHHPQ 13
                ***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
CKFGVTCKFH HPQPAGTSLP ASAPQFYQQV QSPTVPLPEQ FGGASPSVRV ARPPVLPGSY  60
VQGAYGPVLL SPGVVPFPGW SPYSAPVSPV LSPGAQPAVG ATSLYGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47850.14e-47C3H family protein