PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI30524.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GATA | ||||||||
Protein Properties | Length: 125aa MW: 14168.8 Da PI: 9.9675 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 31.1 | 3.3e-10 | 106 | 125 | 1 | 20 |
GATA 1 CsnCgttkTplWRrgpdgnk 20 Cs C+ttkTplWR+gp+g+k MCI30524.1 106 CSDCNTTKTPLWRSGPRGPK 125 ******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence |
MVSSGSWDNN STAENHEIIK SKHKLTIRWK KEGINNNIEE VDHHDDGTSV KWMSSKMRMM 60 RKMIDSDQTS GSNIASNSKQ KFEDQKQPLS PLGSSTNNYS NQIRVCSDCN TTKTPLWRSG 120 PRGPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56860.1 | 1e-12 | GATA family protein |