PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI30508.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 129aa MW: 14568.5 Da PI: 9.8319 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 91.6 | 1.3e-28 | 1 | 66 | 61 | 127 |
NAM 61 FskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 F+++d+ky++g+r nrat++gyWkatgkd++++s ++ l+g+kktLvfy+grapkg++t+Wvmheyr MCI30508.1 1 FCPQDRKYPNGHRLNRATTHGYWKATGKDRRIKS-GNILIGMKKTLVFYSGRAPKGKRTNWVMHEYR 66 99********************************.99*****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
FCPQDRKYPN GHRLNRATTH GYWKATGKDR RIKSGNILIG MKKTLVFYSG RAPKGKRTNW 60 VMHEYRPTLK ELDGTNPGQN PYVLCRLFKK NDESLEVSNC GEVEQATSAP LTANYSPEEI 120 QSDPAPITA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 5e-55 | NAC family protein |