PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI29249.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | HSF | ||||||||
Protein Properties | Length: 103aa MW: 11774.4 Da PI: 6.518 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 84.5 | 1.5e-26 | 34 | 92 | 2 | 60 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Fl+k+y+++ed++++++isw+e+g++f+v++++ fa+++Lpk+Fkh+nf+SFvRQLn+Y MCI29249.1 34 FLTKTYNLVEDKSIDDVISWNEDGSTFIVWNPTVFASNLLPKHFKHNNFSSFVRQLNTY 92 9********************************************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 103 aa Download sequence |
MAPPPPPVEN NAESTTTVTT TPILESQRSI PTPFLTKTYN LVEDKSIDDV ISWNEDGSTF 60 IVWNPTVFAS NLLPKHFKHN NFSSFVRQLN TYVIQFILKF FLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62020.1 | 2e-40 | HSF family protein |