PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI28873.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | HSF | ||||||||
Protein Properties | Length: 53aa MW: 6227.06 Da PI: 10.5705 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 25.2 | 4.2e-08 | 4 | 38 | 60 | 103 |
TTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 60 YgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkkse 103 +gF+k+++++ weF ++ F+kgkk+ll++i+r++s+ MCI28873.1 4 FGFRKIDTDK---------WEFFNEGFQKGKKHLLKNIQRRRSS 38 7888888777.........**********************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 53 aa Download sequence |
MMCFGFRKID TDKWEFFNEG FQKGKKHLLK NIQRRRSSQP QQVGNYVGSS SDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G03720.1 | 1e-16 | HSF family protein |